STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM62368.1PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (517 aa)    
Predicted Functional Partners:
EIM62244.1
PFAM: Response regulator receiver domain; Hpt domain.
 
 0.987
EIM62284.1
PFAM: Response regulator receiver domain.
 0.986
EIM64964.1
PAS domain S-box; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 0.986
EIM65013.1
Hypothetical protein.
  
 0.970
EIM62950.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 0.960
EIM62979.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain.
 
 0.959
EIM64792.1
PFAM: GAF domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 0.949
EIM65070.1
PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
 
0.945
EIM63927.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
 
0.921
EIM62243.1
PAS domain S-box; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
0.919
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.