node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIM62385.1 | EIM62399.1 | DespoDRAFT_00359 | DespoDRAFT_00375 | PFAM: ATPase family associated with various cellular activities (AAA). | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | 0.711 |
EIM62385.1 | EIM63209.1 | DespoDRAFT_00359 | DespoDRAFT_01245 | PFAM: ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.699 |
EIM62399.1 | EIM62385.1 | DespoDRAFT_00375 | DespoDRAFT_00359 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | PFAM: ATPase family associated with various cellular activities (AAA). | 0.711 |
EIM62399.1 | EIM62980.1 | DespoDRAFT_00375 | DespoDRAFT_01005 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | 0.925 |
EIM62399.1 | EIM63209.1 | DespoDRAFT_00375 | DespoDRAFT_01245 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | Hypothetical protein. | 0.966 |
EIM62399.1 | EIM64838.1 | DespoDRAFT_00375 | DespoDRAFT_03028 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | PFAM: Viral (Superfamily 1) RNA helicase. | 0.941 |
EIM62399.1 | EIM65067.1 | DespoDRAFT_00375 | DespoDRAFT_03289 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | PFAM: ATP dependent DNA ligase domain. | 0.648 |
EIM62399.1 | polA | DespoDRAFT_00375 | DespoDRAFT_00831 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.900 |
EIM62399.1 | recA | DespoDRAFT_00375 | DespoDRAFT_03161 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.696 |
EIM62399.1 | sbcD | DespoDRAFT_00375 | DespoDRAFT_00374 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.997 |
EIM62399.1 | sbcD-2 | DespoDRAFT_00375 | DespoDRAFT_00980 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.991 |
EIM62399.1 | topA | DespoDRAFT_00375 | DespoDRAFT_01605 | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | DNA topoisomerase I, bacterial; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removi [...] | 0.649 |
EIM62980.1 | EIM62399.1 | DespoDRAFT_01005 | DespoDRAFT_00375 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | ATPase involved in DNA repair; TIGRFAM: exonuclease SbcC. | 0.925 |
EIM62980.1 | EIM63209.1 | DespoDRAFT_01005 | DespoDRAFT_01245 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | Hypothetical protein. | 0.960 |
EIM62980.1 | EIM64838.1 | DespoDRAFT_01005 | DespoDRAFT_03028 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | PFAM: Viral (Superfamily 1) RNA helicase. | 0.960 |
EIM62980.1 | EIM65067.1 | DespoDRAFT_01005 | DespoDRAFT_03289 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | PFAM: ATP dependent DNA ligase domain. | 0.584 |
EIM62980.1 | polA | DespoDRAFT_01005 | DespoDRAFT_00831 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.991 |
EIM62980.1 | recA | DespoDRAFT_01005 | DespoDRAFT_03161 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.958 |
EIM62980.1 | sbcD | DespoDRAFT_01005 | DespoDRAFT_00374 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.932 |
EIM62980.1 | sbcD-2 | DespoDRAFT_01005 | DespoDRAFT_00980 | HRDC domain-containing protein; PFAM: PIF1 helicase; HRDC domain. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.932 |