STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM62444.1Integrase family protein; PFAM: Integrase core domain. (492 aa)    
Predicted Functional Partners:
EIM62445.1
DNA replication protein; PFAM: IstB-like ATP binding protein; Belongs to the DnaA family.
     0.946
EIM62446.1
Hypothetical protein.
       0.773
EIM62474.1
DNA replication protein; PFAM: IstB-like ATP binding protein.
     0.773
EIM63119.1
DNA replication protein; PFAM: IstB-like ATP binding protein.
     0.773
EIM64648.1
DNA replication protein; PFAM: IstB-like ATP binding protein; Belongs to the DnaA family.
     0.773
EIM63704.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.712
EIM63439.1
PFAM: Arylsulfotransferase (ASST).
  
     0.506
EIM62447.1
Hypothetical protein.
       0.495
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.