STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63570.1Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase. (440 aa)    
Predicted Functional Partners:
EIM65129.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.885
EIM65426.1
PFAM: Tetratricopeptide repeat.
  
 
 0.880
EIM63571.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
 
  0.822
EIM63569.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); exosortase A system-associated amidotransferase 1.
  
    0.803
EIM63572.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
     
 0.803
EIM63568.1
Hypothetical protein.
  
    0.769
EIM63574.1
Sulfotransferase family protein.
       0.749
EIM63573.1
Hypothetical protein.
       0.746
EIM64866.1
Hypothetical protein.
  
 
 0.736
EIM63566.1
Hypothetical protein.
       0.660
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.