STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63572.1Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase. (308 aa)    
Predicted Functional Partners:
EIM63578.1
Hypothetical protein.
     0.912
EIM63571.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
     0.886
EIM63569.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); exosortase A system-associated amidotransferase 1.
 
     0.855
EIM62630.1
PFAM: Glycosyl transferase family 2.
  
 
 0.846
EIM63568.1
Hypothetical protein.
    
  0.810
EIM63570.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
     
 0.803
EIM63555.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated.
 
   
 0.791
EIM63573.1
Hypothetical protein.
       0.746
EIM63585.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; TIGRFAM: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family.
 
     0.734
EIM63574.1
Sulfotransferase family protein.
       0.731
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.