STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63581.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
EIM63580.1
Hypothetical protein.
 
     0.924
EIM63579.1
Protein involved in cellulose biosynthesis (CelD).
 
     0.801
EIM63583.1
PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
       0.784
EIM63584.1
PFAM: Acyltransferase family.
       0.783
EIM63582.1
PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain.
       0.782
EIM63585.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; TIGRFAM: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family.
       0.773
EIM63578.1
Hypothetical protein.
       0.763
EIM64601.1
Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I.
  
  
  0.501
EIM63577.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
       0.496
carB
Carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
     
 0.466
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.