STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63595.1Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain. (450 aa)    
Predicted Functional Partners:
EIM63596.1
PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family.
       0.664
EIM63598.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain; manually curated.
 
    
0.550
EIM63162.1
Hypothetical protein.
 
     0.520
EIM63594.1
PFAM: Nucleotidyltransferase domain.
 
     0.486
EIM62957.1
PFAM: Protein of unknown function (DUF2813).
  
    0.454
EIM63597.1
Nucleotidyltransferase family protein; PFAM: Nucleotidyltransferase domain.
       0.439
EIM64915.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
  
  
 
0.428
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.