STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63621.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (220 aa)    
Predicted Functional Partners:
EIM64805.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 0.985
EIM63622.1
PFAM: Predicted permease.
 
 
 0.934
EIM64254.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; PFAM: ABC transporter.
 
    
0.904
EIM63620.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
 
     0.890
EIM62486.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.834
EIM63809.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.774
EIM62845.1
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.763
EIM64175.1
PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family.
 0.740
EIM62506.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.733
EIM65398.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
 0.729
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.