STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63698.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
EIM62741.1
PFAM: Uncharacterised protein family (UPF0153).
 
     0.778
EIM62738.1
Dehydrogenase of unknown specificity; Short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
  
     0.739
EIM64606.1
Hypothetical protein.
  
     0.738
EIM63459.1
Hypothetical protein.
  
     0.733
EIM62341.1
PFAM: Putative exonuclease, RdgC.
  
     0.722
EIM62401.1
Hypothetical protein; PFAM: YcaO-like family; Tetratricopeptide repeat; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis docking scaffold, SagD family.
  
     0.722
EIM62312.1
Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
  
     0.714
EIM64386.1
PFAM: Fructose-bisphosphate aldolase class-II.
  
     0.699
EIM62732.1
Hypothetical protein.
  
     0.690
EIM64187.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
  
     0.662
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.