STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM63810.1ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter. (257 aa)    
Predicted Functional Partners:
EIM64805.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 0.994
EIM63809.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  0.976
EIM63808.1
Hypothetical protein.
 
 
   0.916
EIM62482.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
    
0.905
EIM64195.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA.
     
0.901
EIM64253.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
    0.871
EIM62506.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  0.844
EIM62845.1
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.816
EIM65398.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  0.765
EIM63807.1
Hypothetical protein.
 
     0.760
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.