STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM64605.1PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. (467 aa)    
Predicted Functional Partners:
EIM64604.1
Hypothetical protein.
       0.714
EIM64866.1
Hypothetical protein.
   
 0.566
EIM64925.1
PFAM: Glycosyl hydrolase family 3 N terminal domain.
   
 
 0.547
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
     
 0.544
EIM65423.1
PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; 2-nitropropane dioxygenase; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
   
 0.531
EIM63467.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
     
 0.519
EIM65427.1
Hypothetical protein.
    
 0.519
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
    
  0.512
EIM65142.1
PFAM: Pyridoxal-dependent decarboxylase conserved domain; TIGRFAM: putative pyridoxal-dependent aspartate 1-decarboxylase.
   
 
 0.502
EIM63417.1
Hypothetical protein.
    
 
 0.483
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.