STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM64831.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
EIM64828.1
Hypothetical protein.
 
     0.926
EIM64830.1
PFAM: Nitrate reductase gamma subunit.
 
     0.926
EIM64829.1
Fe-S oxidoreductase.
 
     0.925
EIM64826.1
PFAM: Polysulphide reductase, NrfD.
 
     0.924
EIM64827.1
Fe-S-cluster-containing hydrogenase subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
     0.846
EIM64790.1
Hypothetical protein.
  
     0.728
EIM63365.1
PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family.
 
   
 0.676
EIM63313.1
PFAM: Nitrite and sulphite reductase 4Fe-4S domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
     0.637
EIM63315.1
PFAM: Dissimilatory sulfite reductase D (DsrD).
 
     0.630
EIM63314.1
Sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit.
 
     0.612
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.