STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM65444.1PFAM: Phage tail sheath protein. (609 aa)    
Predicted Functional Partners:
EIM65437.1
Phage protein D; PFAM: Phage late control gene D protein (GPD).
 
 
 0.997
EIM65438.1
Hypothetical protein; PFAM: LysM domain.
 
 
 0.992
EIM65447.1
Putative phage tail region protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
 
 0.990
EIM65435.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
 
   0.989
EIM65433.1
PFAM: Baseplate J-like protein.
 
 
 0.967
EIM65434.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
 
 0.966
EIM65440.1
Hypothetical protein.
 
     0.950
EIM65441.1
PFAM: ATPase family associated with various cellular activities (AAA).
     0.950
EIM65442.1
Hypothetical protein.
 
     0.950
EIM65443.1
Putative phage tail region protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
     0.946
Your Current Organism:
Desulfobacter postgatei
NCBI taxonomy Id: 879212
Other names: D. postgatei 2ac9, Desulfobacter postgatei 2ac9, Desulfobacter postgatei DSM 2034, Desulfobacter postgatei str. 2ac9, Desulfobacter postgatei strain 2ac9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.