STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12176.1COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: pgn:PGN_0208 hypothetical protein; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase, FKBP-type; IMG reference gene:2504824100; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase. (181 aa)    
Predicted Functional Partners:
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.827
surE
Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.740
AEE12174.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.712
AEE13029.1
Heat shock protein Hsp90; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: pgi:PG0045 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SPTR: Hsp90 protein; IMG reference gene:2504825000; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein.
   
 0.708
AEE12711.1
Peptidylprolyl isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: pdi:BDI_2706 peptidyl-prolyl cis-trans isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase, FKBP-type; IMG reference gene:2504824668; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase.
 
     0.632
AEE12710.1
Peptidylprolyl isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: pdi:BDI_2705 FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase, FKBP-type; IMG reference gene:2504824667; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase.
  
    0.591
AEE13150.1
KEGG: pgn:PGN_0832 gliding motility protein SprA; SPTR: Putative uncharacterized protein; IMG reference gene:2504825126.
  
 
 
 0.591
AEE12928.1
COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: pgi:PG2189 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Amino acid kinase family; TIGRFAM: Aspartate kinase region; IMG reference gene:2504824891; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
  
 
   0.568
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.534
AEE13452.1
KEGG: pdi:BDI_1126 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825442.
  
 
 
 0.510
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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