STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12243.1KEGG: pgn:PGN_0178 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824168; PFAM: Protein of unknown function (DUF3575). (198 aa)    
Predicted Functional Partners:
AEE12242.1
InterPro IPR001440:IPR019734; KEGG: bfs:BF2183 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504824167; PFAM: Tetratricopeptide repeat; OmpA family.
  
 0.937
AEE12015.1
KEGG: pgi:PG0698 putative lipoprotein; SPTR: Putative uncharacterized protein; IMG reference gene:2504823934.
  
 
   0.786
AEE12112.1
KEGG: pdi:BDI_2595 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824036; PFAM: OmpA family.
  
 0.782
AEE12801.1
KEGG: pdi:BDI_2595 hypothetical protein; SPTR: Putative exported protein; IMG reference gene:2504824762; PFAM: OmpA family.
    0.775
AEE13556.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: pgn:PGN_0728 outer membrane protein 40 precursor; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein 40; IMG reference gene:2504825552; PFAM: OmpA family.
  
     0.768
AEE12833.1
KEGG: pgi:PG1611 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824795.
  
     0.738
AEE12251.1
ErfK/YbiS/YcfS/YnhG family protein; InterPro IPR005490; KEGG: pdi:BDI_0343 hypothetical protein; PFAM: YkuD domain; SPTR: Putative lipoprotein; IMG reference gene:2504824176; PFAM: L,D-transpeptidase catalytic domain.
 
     0.726
AEE13156.1
KEGG: pgn:PGN_1763 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825132; PFAM: Protein of unknown function (DUF2764).
  
     0.702
AEE13148.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: pgi:PG1341 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Sporulation and cell division repeat protein; IMG reference gene:2504825124; PFAM: Sporulation related domain.
  
   
 0.687
AEE13526.1
PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: pgi:PG1726 PDZ domain-containing protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: PDZ/DHR/GLGF domain protein; IMG reference gene:2504825522; PFAM: PDZ domain (Also known as DHR or GLGF).
  
 
   0.670
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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