Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
AEE12436.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (300 aa)    
Predicted Functional Partners:
AEE13611.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
AEE13612.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; IMG reference gene:2504825609; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.986
AEE12014.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.878
AEE12438.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: pgi:PG0922 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Efflux ABC transporter, permease protein; IMG reference gene:2504824365; PFAM: Predicted permease.
       0.812
AEE12435.1
MATE efflux family protein; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: pgi:PG1640 DNA-damage-inducible protein F; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; IMG reference gene:2504824362; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
    0.801
AEE12034.1
KEGG: pgi:PG0160 hypothetical protein; SPTR: Conserved domain protein; IMG reference gene:2504823954; PFAM: Nucleotidyl transferase.
  
  
 0.800
AEE12437.1
KEGG: pgi:PG0125 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824364.
       0.773
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.694
AEE12519.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: pgn:PGN_1239 probable lipopolysaccharide biosynthesis glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase, group 2 family protein; IMG reference gene:2504824451; PFAM: Glycosyl transferase family 2.
 
  
 0.628
AEE12248.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: pgn:PGN_0361 putative glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase, group 2 family protein; IMG reference gene:2504824173; PFAM: Glycosyl transferase family 2.
 
  
 0.603
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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