STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12714.1InterPro IPR003343; KEGG: Ig domain protein group 2 domain protein; PFAM: Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2; SPTR: Bacterial group 2 Ig-like protein; IMG reference gene:2504824671; PFAM: Bacterial Ig-like domain (group 2). (521 aa)    
Predicted Functional Partners:
AEE12821.1
COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR001902:IPR011547:IPR002645; KEGG: pgn:PGN_0017 sulfate transporter permease; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate permease; TIGRFAM: Sulphate anion transporter; IMG reference gene:2504824783; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1.
    
 
 0.679
AEE12027.1
Forkhead-associated protein; InterPro IPR000253; KEGG: pgn:PGN_1034 hypothetical protein; PFAM: Forkhead-associated; SPTR: FHA domain protein; IMG reference gene:2504823947; PFAM: FHA domain.
    
  0.627
AEE12340.1
SPTR: Putative uncharacterized protein; IMG reference gene:2504824266.
  
 
 0.601
AEE13139.1
Hypothetical protein; SPTR: Papain family cysteine protease; IMG reference gene:2504825115.
  
 
 0.601
AEE13544.1
Ig domain protein group 2 domain protein; InterPro IPR003343; PFAM: Bacterial Ig-like, group 2; SPTR: Bacterial group 2 Ig-like protein; IMG reference gene:2504825540; PFAM: Bacterial Ig-like domain (group 2).
  
 
 0.601
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.521
AEE12715.1
Thioredoxin domain-containing protein; InterPro IPR013766; PFAM: Thioredoxin domain; SPTR: Thioredoxin; IMG reference gene:2504824672.
       0.495
AEE12938.1
UBA/THIF-type NAD/FAD binding protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: pgi:PG0446 ThiF protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdenum cofactor synthesis protein 3; IMG reference gene:2504824901; PFAM: MoeZ/MoeB domain; ThiF family.
    
 0.461
AEE12745.1
COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: pgi:PG1226 peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; IMG reference gene:2504824704; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
    
 0.446
AEE13624.1
COGs: COG1102 Cytidylate kinase; KEGG: ere:EUBREC_1239 cytidylate kinase; SPTR: Putative uncharacterized protein; IMG reference gene:2504825621.
  
     0.424
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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