STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12715.1Thioredoxin domain-containing protein; InterPro IPR013766; PFAM: Thioredoxin domain; SPTR: Thioredoxin; IMG reference gene:2504824672. (587 aa)    
Predicted Functional Partners:
AEE13643.1
KEGG: bvu:BVU_2772 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825640.
    
 
 0.554
AEE13227.1
KEGG: cpi:Cpin_3942 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825206.
   
 
 0.533
AEE11991.1
InterPro IPR019734; KEGG: pgi:PG1430 TPR domain-containing protein; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504823910.
  
  
 0.499
AEE13007.1
Hypothetical protein; KEGG: ppn:Palpr_1161 tetratricopeptide tpr_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504824978.
  
  
 0.499
AEE13261.1
Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR019734:IPR013105:IPR001440:IPR011717; KEGG: pgn:PGN_0464 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504825241; PFAM: Tetratricopeptide repeat.
  
  
 0.499
AEE12714.1
InterPro IPR003343; KEGG: Ig domain protein group 2 domain protein; PFAM: Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2; SPTR: Bacterial group 2 Ig-like protein; IMG reference gene:2504824671; PFAM: Bacterial Ig-like domain (group 2).
       0.495
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
 
 0.457
AEE12429.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260; KEGG: pgn:PGN_0674 hypothetical protein; SPTR: TonB family C-terminal domain protein; TIGRFAM: TonB, C-terminal; IMG reference gene:2504824356; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
   
 
 0.432
AEE13493.1
TonB family protein; InterPro IPR003538:IPR006260; KEGG: pgn:PGN_0809 putative TonB protein; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB-dependent receptor; TIGRFAM: TonB, C-terminal; IMG reference gene:2504825489; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
   
 
 0.432
AEE12016.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR008816:IPR006665; KEGG: pgi:PG2054 lipoprotein PG3; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; SPTR: OmpA family protein; IMG reference gene:2504823935; PFAM: OmpA family.
   
 
 0.418
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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