STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12890.1Protein of unknown function DUF1212; COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: bth:BT_0975 putative integral membrane protein; PFAM: Protein of unknown function DUF1212; SPTR: Putative uncharacterized protein; IMG reference gene:2504824853; PFAM: Protein of unknown function (DUF1212). (258 aa)    
Predicted Functional Partners:
AEE12889.1
COGs: COG3610 conserved hypothetical protein; KEGG: ppn:Palpr_1462 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824852.
 
  
 0.979
AEE12888.1
KEGG: bfs:BF2535 hypothetical protein; SPTR: Putative membrane protein; IMG reference gene:2504824851.
 
    0.935
AEE12891.1
Hypothetical protein; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: pmz:HMPREF0659_A7268 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824854; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
 
     0.488
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.482
AEE11985.1
InterPro IPR000620; KEGG: ppn:Palpr_1888 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative membrane protein; IMG reference gene:2504823904; PFAM: EamA-like transporter family.
  
     0.446
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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