STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12964.1SPTR: Putative lipoprotein; IMG reference gene:2504824927. (94 aa)    
Predicted Functional Partners:
AEE12965.1
KEGG: hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504824928.
      
0.651
AEE12966.1
KEGG: bfr:BF3847 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824929.
       0.558
AEE12963.1
SPTR: Putative lipoprotein; IMG reference gene:2504824926.
       0.520
AEE12962.1
COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR020821:IPR001604; KEGG: cts:Ctha_1807 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; SPTR: DNA/RNA non-specific endonuclease; IMG reference gene:2504824925; PFAM: DNA/RNA non-specific endonuclease.
       0.482
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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