STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13167.1Protein of unknown function DUF262; COGs: COG1479 conserved hypothetical protein; InterPro IPR004919:IPR011089; KEGG: ctc:CTC00689 hypothetical protein; PFAM: Protein of unknown function DUF262; Protein of unknown function DUF1524 RloF; SPTR: Putative uncharacterized protein; IMG reference gene:2504825144; PFAM: Protein of unknown function (DUF1524); Protein of unknown function DUF262. (731 aa)    
Predicted Functional Partners:
AEE13166.1
2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: pgn:PGN_0011 hypothetical protein; PFAM: 2-phosphosulpholactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase; IMG reference gene:2504825143; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.
       0.740
AEE13165.1
COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: pgn:PGN_1666 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Putative phosphoribosylformylglycinamidine synthase; IMG reference gene:2504825142; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form.
       0.545
AEE13164.1
DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: pgi:PG0295 DNA processing protein DprA, putative; PFAM: DNA recombination-mediator protein A; SPTR: DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; IMG reference gene:2504825141; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.
       0.493
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.491
AEE12654.1
Protein of unknown function DUF262; InterPro IPR004919; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF262; SPTR: Putative uncharacterized protein; IMG reference gene:2504824601; PFAM: Protein of unknown function DUF262.
 
     0.466
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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