STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13318.1COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3512 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2504825300; PFAM: ABC transporter; ABC transporter transmembrane region. (576 aa)    
Predicted Functional Partners:
AEE13322.1
Regulatory protein TetR; InterPro IPR001647; KEGG: pgn:PGN_1921 probable transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2504825304; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.851
AEE13320.1
Hypothetical protein; COGs: COG1033 exporter of the RND superfamily protein; KEGG: pgi:PG1180 hypothetical protein; SPTR: Membrane protein; IMG reference gene:2504825302; PFAM: MMPL family.
 
     0.840
AEE13319.1
COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3513 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2504825301; PFAM: ABC transporter transmembrane region; ABC transporter.
 
    
0.838
AEE13316.1
KEGG: pgi:PG1178 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825298.
 
     0.809
AEE13317.1
KEGG: pgi:PG1179 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825299; PFAM: Protein of unknown function (DUF1329).
 
   
 0.797
AEE12054.1
Regulatory protein TetR; InterPro IPR001647; KEGG: transcriptional regulator, TetR family; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; IMG reference gene:2504823975; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.732
AEE13315.1
KEGG: pmz:HMPREF0659_A7073 TraG family protein; SPTR: TraG family protein; IMG reference gene:2504825297.
       0.529
AEE13321.1
Hypothetical protein; IMG reference gene:2504825303.
       0.455
AEE12758.1
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: pgi:PG1033 hypothetical protein; PFAM: Protein of unknown function DUF140; SPTR: Putative uncharacterized protein; IMG reference gene:2504824717; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
   
 
 0.445
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.435
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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