STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13349.1Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: pgi:PG0956 M24/M37 family peptidase putative; PFAM: Peptidase M23; SPTR: Peptidase, M23 family; IMG reference gene:2504825337; PFAM: Peptidase family M23. (433 aa)    
Predicted Functional Partners:
AEE13568.1
Protein of unknown function DUF214; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: pgn:PGN_0573 putative cell division protein FtsX; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Efflux ABC transporter, permease protein; IMG reference gene:2504825564; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.818
AEE13347.1
Hypothetical protein; InterPro IPR019734; KEGG: pdi:BDI_3175 hypothetical protein; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504825335.
  
    0.760
AEE13348.1
SPTR: Putative lipoprotein; IMG reference gene:2504825336.
       0.739
AEE13350.1
Riboflavin biosynthesis protein RibF; COGs: COG0196 FAD synthase; InterPro IPR004821:IPR002606:IPR015864:IPR015865; KEGG: coc:Coch_1375 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; PRIAM: FAD synthetase., Riboflavin kinase; SPTR: Riboflavin biosynthesis protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; Cytidyltransferase-related; IMG reference gene:2504825338; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
  
    0.711
AEE13450.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440; KEGG: pgi:PG1385 TPR domain-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504825440; PFAM: Tetratricopeptide repeat.
 
 
 
 0.686
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.661
AEE13560.1
Hypothetical protein; InterPro IPR019734; KEGG: pgn:PGN_1513 hypothetical protein; SPTR: Tetratricopeptide repeat protein; IMG reference gene:2504825556.
 
 
 
 0.595
AEE12111.1
Peptidase M48 Ste24p; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: pgn:PGN_2064 putative peptidase M48 family; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family; IMG reference gene:2504824035; PFAM: Peptidase family M48.
 
 
 
 0.589
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.568
AEE12143.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR018392:IPR002482; KEGG: pgi:PG2192 M24/M37 family peptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidase, M23/M37 family; IMG reference gene:2504824067; PFAM: Peptidase family M23; LysM domain.
 
   
0.565
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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