STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13395.1COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: bth:BT_2750 putative protein-tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Acid phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight protein-tyrosine-phosphatase; IMG reference gene:2504825385; PFAM: Low molecular weight phosphotyrosine protein phosphatase. (169 aa)    
Predicted Functional Partners:
AEE12732.1
PHP domain protein; COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013; KEGG: pgn:PGN_1525 probable capsular polysaccharide biosynthesis protein; PFAM: PHP, C-terminal; SPTR: PHP domain protein; IMG reference gene:2504824691.
     
 0.901
AEE13394.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR004552:IPR002123; KEGG: pgn:PGN_1384 probable 1-acyl-sn-glycerol-3-phosphate acetyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; IMG reference gene:2504825384; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.778
AEE12733.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: pgn:PGN_1524 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Chain length determinant protein; TIGRFAM: Exopolysaccharide synthesis protein; IMG reference gene:2504824692; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.600
AEE13396.1
Sulfatase; COGs: COG2194 membrane-associated metal-dependent hydrolase; InterPro IPR000917; KEGG: pgn:PGN_1313 hypothetical protein; PFAM: Sulfatase; SPTR: Arylsulfatase; IMG reference gene:2504825386; PFAM: Sulfatase.
       0.561
AEE13397.1
Sulfatase; COGs: COG2194 membrane-associated metal-dependent hydrolase; InterPro IPR000917; KEGG: pgn:PGN_1313 hypothetical protein; PFAM: Sulfatase; SPTR: Arylsulfatase; IMG reference gene:2504825387; PFAM: Sulfatase.
       0.561
AEE12082.1
COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: pgi:PG0275 thioredoxin family protein; PFAM: Thioredoxin domain; SPTR: Putative thioredoxin; IMG reference gene:2504824005; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
  
 
 0.528
AEE12718.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: pgn:PGN_0033 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2504824675; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
  
 
 0.528
AEE13393.1
COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: pgi:PG0088 M16 family peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; PRIAM: processing peptidase; SPTR: Peptidase M16 inactive domain protein; IMG reference gene:2504825383; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
  
    0.519
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.501
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.449
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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