STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13414.1KEGG: pdi:BDI_1187 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825404. (996 aa)    
Predicted Functional Partners:
AEE13202.1
UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: pgi:PG2072 UvrD/REP helicase domain-containing protein; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; IMG reference gene:2504825180; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.996
AEE13415.1
Abortive infection protein; InterPro IPR003675; KEGG: pgn:PGN_1454 probable abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; IMG reference gene:2504825405; PFAM: CAAX amino terminal protease family.
       0.814
AEE13417.1
InterPro IPR002482:IPR018392; KEGG: pgi:PG2150 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM domain protein; IMG reference gene:2504825407; PFAM: LysM domain.
 
     0.805
AEE13416.1
KEGG: pgn:PGN_0197 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825406.
       0.773
AEE13013.1
Protein of unknown function DUF349; InterPro IPR007139; KEGG: pgn:PGN_0935 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: Putative uncharacterized protein; IMG reference gene:2504824984; PFAM: Domain of Unknown Function (DUF349).
  
     0.676
AEE13413.1
KEGG: pgi:PG1035 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825403.
       0.645
AEE13412.1
Uncharacterized protein family UPF0029, Impact, N-terminal protein; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: pgn:PGN_0237 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: YigZ family protein; IMG reference gene:2504825402; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family.
       0.609
AEE13391.1
KEGG: pgn:PGN_1195 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825381.
  
     0.579
AEE13650.1
KEGG: pdi:BDI_1862 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825647.
  
     0.519
AEE12226.1
KEGG: ppn:Palpr_1181 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504824151.
  
     0.512
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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