STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBPeptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (347 aa)    
Predicted Functional Partners:
AEE12787.1
Protein-disulfide reductase; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: pdi:BDI_3793 thiol:disulfide interchange protein; PFAM: Cytochrome c assembly protein, transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Cytochrome C biogenesis protein transmembrane region; IMG reference gene:2504824748; PFAM: Cytochrome C biogenesis protein transmembrane region.
   
 
 0.998
AEE13310.1
InterPro IPR003834; KEGG: pmz:HMPREF0659_A7365 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: Putative uncharacterized protein; IMG reference gene:2504825291; PFAM: Cytochrome C biogenesis protein transmembrane region.
   
 
 0.998
AEE12015.1
KEGG: pgi:PG0698 putative lipoprotein; SPTR: Putative uncharacterized protein; IMG reference gene:2504823934.
   
 0.964
AEE12195.1
Thioredoxin domain-containing protein; InterPro IPR013766:IPR003343; PFAM: Thioredoxin domain; Bacterial Ig-like, group 2; SPTR: Putative uncharacterized protein; IMG reference gene:2504824119.
   
 0.964
AEE12705.1
InterPro IPR000866; KEGG: pgn:PGN_1181 probable thiol:disulfide oxidoreductase; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Antioxidant, AhpC/TSA family; IMG reference gene:2504824662; PFAM: AhpC/TSA family.
   
 0.964
AEE12923.1
InterPro IPR000866; KEGG: pgn:PGN_1181 probable thiol:disulfide oxidoreductase; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Antioxidant, AhpC/TSA family; IMG reference gene:2504824886; PFAM: AhpC/TSA family.
   
 0.964
AEE13308.1
KEGG: pmz:HMPREF0659_A7367 putative redox-active disulfide protein 2; SPTR: Putative redox-active disulfide protein 2; manually curated; IMG reference gene:2504825289; TIGRFAM: small redox-active disulfide protein 2.
   
 0.964
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.961
AEE13445.1
InterPro IPR013097; KEGG: pgi:PG0652 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SPTR: Stress responsive A/B barrel domain protein; IMG reference gene:2504825435; PFAM: Stress responsive A/B Barrel Domain.
       0.826
AEE13444.1
COGs: COG0560 Phosphoserine phosphatase; InterPro IPR004469:IPR006383:IPR002912:IPR005834; KEGG: pgn:PGN_0692 phosphoserine phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; Amino acid-binding ACT; PRIAM: Phosphoserine phosphatase; SPTR: Phosphoserine phosphatase SerB; TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; IMG reference gene:2504825434; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB.
   
 
 0.816
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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