STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13617.1SPTR: Putative lipoprotein; IMG reference gene:2504825614. (136 aa)    
Predicted Functional Partners:
AEE13618.1
KEGG: pgn:PGN_1543 hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504825615; PFAM: Orthopoxvirus protein of unknown function (DUF830).
       0.618
AEE13616.1
COGs: COG1027 Aspartate ammonia-lyase; InterPro IPR000362:IPR018951; KEGG: pgn:PGN_0377 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal; PRIAM: Aspartate ammonia-lyase; SPTR: Putative aspartate ammonia-lyase; IMG reference gene:2504825613; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase.
       0.601
AEE13619.1
Hypothetical protein; KEGG: aci:ACIAD1233 putative signal peptide; SPTR: Putative lipoprotein; IMG reference gene:2504825616.
       0.506
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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