STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE13642.1Peptidase M75, Imelysin; COGs: COG3489 periplasmic lipoprotein; InterPro IPR018976; KEGG: bvu:BVU_2771 putative iron-regulated protein A precursor; PFAM: Peptidase M75, Imelysin; SPTR: Imelysin; IMG reference gene:2504825639; PFAM: Imelysin. (381 aa)    
Predicted Functional Partners:
AEE13641.1
Protein of unknown function DUF1111; COGs: COG3488 thiol oxidoreductase; InterPro IPR010538; KEGG: bvu:BVU_2770 hypothetical protein; PFAM: Protein of unknown function DUF1111; SPTR: Putative lipoprotein; IMG reference gene:2504825638; PFAM: Protein of unknown function (DUF1111).
 
  
 0.945
AEE13643.1
KEGG: bvu:BVU_2772 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504825640.
 
    0.927
AEE13640.1
Protein of unknown function DUF1111; COGs: COG3488 thiol oxidoreductase; InterPro IPR010538; KEGG: bvu:BVU_2770 hypothetical protein; PFAM: Protein of unknown function DUF1111; SPTR: Putative lipoprotein; IMG reference gene:2504825637; PFAM: Protein of unknown function (DUF1111).
 
  
 0.921
AEE13639.1
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: bvu:BVU_2769 cytochrome c biogenesis protein; PFAM: Cytochrome c assembly protein; SPTR: Putative cytochrome c-type biogenesis protein CcsB; IMG reference gene:2504825636; PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
  
    0.517
AEE13177.1
KEGG: hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504825155.
  
     0.511
AEE12763.1
PepSY-associated TM helix domain protein; InterPro IPR005625; KEGG: bvu:BVU_2510 hypothetical protein; PFAM: PepSY-associated TM helix; SPTR: PepSY domain protein; IMG reference gene:2504824723.
  
    0.434
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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