shn_01940 protein (Shinella sp. HZN7) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

shn_01940

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (652 aa)

Predicted Functional Partners:

shn_01930

0.819

shn_01935

0.816

shn_01945

0.781

shn_07905

0.711

shn_01920

0.433

shn_01925

0.433

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
shn_01920	shn_01925	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
shn_01920	shn_01930	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
shn_01920	shn_01935	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.460
shn_01920	shn_01940	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.433
shn_01920	shn_01945	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.430
shn_01925	shn_01920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
shn_01925	shn_01930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
shn_01925	shn_01935	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.563
shn_01925	shn_01940	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.433
shn_01925	shn_01945	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.430
shn_01930	shn_01920	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
shn_01930	shn_01925	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
shn_01930	shn_01935	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	0.984
shn_01930	shn_01940	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.819
shn_01930	shn_01945	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.776
shn_01935	shn_01920	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
shn_01935	shn_01925	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
shn_01935	shn_01930	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
shn_01935	shn_01940	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.816
shn_01935	shn_01945	Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.782