STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shn_02060Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
shn_02055
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
shn_02045
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.970
shn_02050
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.969
shn_01490
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.967
shn_02040
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.936
shn_02035
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.923
shn_01510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.917
shn_01485
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.914
shn_01555
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 0.914
shn_14895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.