shn_02430 protein (Shinella sp. HZN7) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

shn_02430

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (179 aa)

Predicted Functional Partners:

shn_02415

0.903

shn_02425

0.809

shn_02440

0.801

shn_17960

0.792

shn_19470

0.663

shn_02435

0.661

shn_02330

0.657

shn_17970

0.657

shn_02420

0.551

msrB

0.528

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
msrB	shn_02415	shn_05335	shn_02415	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
msrB	shn_02420	shn_05335	shn_02420	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
msrB	shn_02430	shn_05335	shn_02430	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.528
msrB	shn_17960	shn_05335	shn_17960	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
msrB	shn_19470	shn_05335	shn_19470	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
shn_02330	shn_02415	shn_02330	shn_02415	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
shn_02330	shn_02420	shn_02330	shn_02420	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
shn_02330	shn_02430	shn_02330	shn_02430	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.657
shn_02330	shn_02440	shn_02330	shn_02440	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.646
shn_02330	shn_17960	shn_02330	shn_17960	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
shn_02415	msrB	shn_02415	shn_05335	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	0.480
shn_02415	shn_02330	shn_02415	shn_02330	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
shn_02415	shn_02420	shn_02415	shn_02420	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
shn_02415	shn_02425	shn_02415	shn_02425	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
shn_02415	shn_02430	shn_02415	shn_02430	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.903
shn_02415	shn_02440	shn_02415	shn_02440	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
shn_02415	shn_17970	shn_02415	shn_17970	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiol:disulfide interchange protein DsbG; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.	0.497
shn_02420	msrB	shn_02420	shn_05335	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.	0.528
shn_02420	shn_02330	shn_02420	shn_02330	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
shn_02420	shn_02415	shn_02420	shn_02415	Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946