shn_02460 protein (Shinella sp. HZN7) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

shn_02460

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (65 aa)

Predicted Functional Partners:

shn_01490

0.720

shn_10165

0.691

cheD

0.678

shn_15780

0.675

shn_04480

0.648

shn_01560

0.646

shn_00795

0.643

shn_02465

0.620

shn_14955

0.619

shn_17470

0.601

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cheD	shn_01490	shn_01515	shn_01490	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
cheD	shn_01560	shn_01515	shn_01560	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
cheD	shn_02460	shn_01515	shn_02460	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.678
cheD	shn_04480	shn_01515	shn_04480	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
cheD	shn_10165	shn_01515	shn_10165	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
cheD	shn_14955	shn_01515	shn_14955	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
cheD	shn_15780	shn_01515	shn_15780	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
cheD	shn_17470	shn_01515	shn_17470	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
shn_00795	shn_01490	shn_00795	shn_01490	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
shn_00795	shn_01560	shn_00795	shn_01560	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
shn_00795	shn_02460	shn_00795	shn_02460	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.643
shn_00795	shn_04480	shn_00795	shn_04480	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
shn_00795	shn_10165	shn_00795	shn_10165	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
shn_00795	shn_14955	shn_00795	shn_14955	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
shn_00795	shn_15780	shn_00795	shn_15780	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
shn_00795	shn_17470	shn_00795	shn_17470	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
shn_01490	cheD	shn_01490	shn_01515	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.	0.986
shn_01490	shn_00795	shn_01490	shn_00795	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
shn_01490	shn_01560	shn_01490	shn_01560	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
shn_01490	shn_02460	shn_01490	shn_02460	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.720