shn_02640 protein (Shinella sp. HZN7) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

shn_02640

ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)

Predicted Functional Partners:

shn_02645

0.915

rbsA-2

0.778

shn_02655

0.664

shn_01470

0.658

shn_02665

0.554

shn_02630

0.534

shn_02635

0.510

shn_02660

0.510

shn_02625

0.508

shn_00050

0.460

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rbsA-2	shn_02625	shn_02650	shn_02625	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
rbsA-2	shn_02630	shn_02650	shn_02630	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.516
rbsA-2	shn_02635	shn_02650	shn_02635	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
rbsA-2	shn_02640	shn_02650	shn_02640	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
rbsA-2	shn_02645	shn_02650	shn_02645	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
rbsA-2	shn_02655	shn_02650	shn_02655	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.988
rbsA-2	shn_02660	shn_02650	shn_02660	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
shn_00050	shn_02640	shn_00050	shn_02640	PTS IIA-like nitrogen-regulatory protein PtsN; Derived by automated computational analysis using gene prediction method: Protein Homology.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
shn_01470	shn_02635	shn_01470	shn_02635	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
shn_01470	shn_02640	shn_01470	shn_02640	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
shn_02625	rbsA-2	shn_02625	shn_02650	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.502
shn_02625	shn_02630	shn_02625	shn_02630	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
shn_02625	shn_02635	shn_02625	shn_02635	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
shn_02625	shn_02640	shn_02625	shn_02640	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
shn_02625	shn_02645	shn_02625	shn_02645	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
shn_02625	shn_02655	shn_02625	shn_02655	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.436
shn_02630	rbsA-2	shn_02630	shn_02650	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.	0.516
shn_02630	shn_02625	shn_02630	shn_02625	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
shn_02630	shn_02635	shn_02630	shn_02635	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
shn_02630	shn_02640	shn_02630	shn_02640	Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534