shn_06390 protein (Shinella sp. HZN7) - STRING interaction network

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Score

shn_06390

DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)

Predicted Functional Partners:

shn_08875

0.995

dnaX

0.993

shn_07125

0.992

shn_19900

0.980

shn_22235

0.970

dnaQ

0.927

pepA

0.859

shn_06375

0.764

shn_11115

0.740

lptD

0.728

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dnaQ	dnaX	shn_19965	shn_01195	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.995
dnaQ	shn_06390	shn_19965	shn_06390	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
dnaQ	shn_07125	shn_19965	shn_07125	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
dnaQ	shn_08875	shn_19965	shn_08875	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
dnaQ	shn_19900	shn_19965	shn_19900	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
dnaQ	shn_22235	shn_19965	shn_22235	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.995
dnaX	dnaQ	shn_01195	shn_19965	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.995
dnaX	shn_06390	shn_01195	shn_06390	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
dnaX	shn_07125	shn_01195	shn_07125	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
dnaX	shn_08875	shn_01195	shn_08875	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
dnaX	shn_19900	shn_01195	shn_19900	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
dnaX	shn_22235	shn_01195	shn_22235	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.996
lptD	pepA	shn_06370	shn_06385	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.501
lptD	shn_06375	shn_06370	shn_06375	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
lptD	shn_06390	shn_06370	shn_06390	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.728
lptD	shn_11115	shn_06370	shn_11115	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
lptD	shn_19900	shn_06370	shn_19900	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
pepA	lptD	shn_06385	shn_06370	Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.501
pepA	shn_06375	shn_06385	shn_06375	Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
pepA	shn_06390	shn_06385	shn_06390	Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859