shn_07330 protein (Shinella sp. HZN7) - STRING interaction network

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[Homology]

Score

shn_07330

Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)

Predicted Functional Partners:

shn_02370

0.805

shn_04055

0.762

shn_06500

0.698

gcvP

0.666

shn_10745

0.549

rne

0.509

shn_17005

0.489

shn_00690

0.485

shn_14420

0.485

shn_15550

0.485

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gcvP	shn_00690	shn_09060	shn_00690	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
gcvP	shn_06500	shn_09060	shn_06500	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.666
gcvP	shn_07330	shn_09060	shn_07330	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
gcvP	shn_10745	shn_09060	shn_10745	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.816
gcvP	shn_14420	shn_09060	shn_14420	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
gcvP	shn_15550	shn_09060	shn_15550	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rne	shn_07330	shn_07335	shn_07330	Ribonuclease; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
shn_00690	gcvP	shn_00690	shn_09060	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.455
shn_00690	shn_02370	shn_00690	shn_02370	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463
shn_00690	shn_06500	shn_00690	shn_06500	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.485
shn_00690	shn_07330	shn_00690	shn_07330	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
shn_00690	shn_10745	shn_00690	shn_10745	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
shn_00690	shn_14420	shn_00690	shn_14420	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
shn_00690	shn_15550	shn_00690	shn_15550	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
shn_02370	shn_00690	shn_02370	shn_00690	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463
shn_02370	shn_06500	shn_02370	shn_06500	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.707
shn_02370	shn_07330	shn_02370	shn_07330	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
shn_02370	shn_10745	shn_02370	shn_10745	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
shn_02370	shn_14420	shn_02370	shn_14420	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
shn_02370	shn_15550	shn_02370	shn_15550	Cu(I)-responsive transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740