STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shn_15700Delayed-early response protein/equilibrative nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family. (335 aa)    
Predicted Functional Partners:
shn_15695
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.963
shn_04235
Invasion associated locus B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
shn_14885
Flagellar export protein FliJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
shn_15690
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.542
shn_09845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
shn_08350
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
shn_09450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
shn_07860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
shn_21485
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
shn_04345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
Your Current Organism:
Shinella sp. HZN7
NCBI taxonomy Id: 879274
Other names: S. sp. HZN7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.