shn_19005 protein (Shinella sp. HZN7) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

shn_19005

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)

Predicted Functional Partners:

shn_19015

0.993

shn_19025

0.983

shn_19020

0.982

shn_19030

0.981

shn_16900

0.975

shn_16905

0.965

shn_19010

0.900

shn_16715

0.591

ugpC

0.591

shn_01795

0.537

Your Current Organism:

Shinella sp. HZN7

NCBI taxonomy Id: 879274
Other names: S. sp. HZN7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
shn_01795	shn_16715	shn_01795	shn_16715	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.908
shn_01795	shn_16900	shn_01795	shn_16900	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.492
shn_01795	shn_16905	shn_01795	shn_16905	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.492
shn_01795	shn_19005	shn_01795	shn_19005	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
shn_01795	shn_19020	shn_01795	shn_19020	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
shn_01795	shn_19025	shn_01795	shn_19025	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.492
shn_01795	shn_19030	shn_01795	shn_19030	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.492
shn_01795	ugpC	shn_01795	shn_22265	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.572
shn_16715	shn_01795	shn_16715	shn_01795	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
shn_16715	shn_16905	shn_16715	shn_16905	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.477
shn_16715	shn_19005	shn_16715	shn_19005	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
shn_16715	shn_19015	shn_16715	shn_19015	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
shn_16715	shn_19020	shn_16715	shn_19020	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
shn_16900	shn_01795	shn_16900	shn_01795	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
shn_16900	shn_16905	shn_16900	shn_16905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.975
shn_16900	shn_19005	shn_16900	shn_19005	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
shn_16900	shn_19010	shn_16900	shn_19010	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Glycerol-3-phosphate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
shn_16900	shn_19015	shn_16900	shn_19015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
shn_16900	shn_19020	shn_16900	shn_19020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
shn_16900	shn_19025	shn_16900	shn_19025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.906