STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EGC81378.1Glycerol-3-phosphate responsive antiterminator; Identified by match to protein family HMM PF04309. (189 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.885
EGC81365.1
Identified by match to protein family HMM PF07892.
 
    0.826
EGC81364.1
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF07992.
 
    0.824
EGC81375.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
     0.807
EGC82807.1
Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.645
EGC82813.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
     0.620
nijF_1
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
     
 0.516
EGC81349.1
Putative 16S pseudouridylate 516 synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.
       0.432
EGC81394.1
Transcriptional regulator, PadR family; Identified by match to protein family HMM PF03551.
       0.432
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
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