STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC81483.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; Identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; Belongs to the NAD synthetase family.
    
 0.870
EGC81970.1
Molybdopterin binding domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00994.
    
 0.798
EGC82015.1
Competence/damage-inducible protein CinA C-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
    
 0.798
EGC81500.1
Replication initiator protein A, N-terminal domain protein; Identified by match to protein family HMM PF06970.
  
  
 0.759
dnaA-2
Chromosomal replication initiator protein DnaA; Identified by match to protein family HMM PF00308.
       0.739
EGC81513.1
BRO family, N-terminal domain protein; Identified by match to protein family HMM PF02498.
       0.737
EGC81488.1
Identified by match to protein family HMM PF02534.
       0.736
EGC81476.1
Hypothetical protein.
       0.727
nijF_1
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.723
nijF_2
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
  0.687
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.