STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC82081.1Transporter, small conductance mechanosensitive ion channel MscS family protein; Identified by match to protein family HMM PF00924. (283 aa)    
Predicted Functional Partners:
EGC82070.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF06107.
       0.810
EGC82065.1
Identified by match to protein family HMM PF00657.
     
 0.795
EGC82085.1
1,4-alpha-glucan-branching enzyme; Identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922.
       0.785
EGC82082.1
Putative translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231.
     
 0.642
EGC82090.1
Peptidase M16 inactive domain protein; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; match to protein family HMM PF08367.
       0.419
EGC82613.1
ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF00528; match to protein family HMM PF04069.
   
  
 0.418
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.