STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC81628.1Chromate transport protein; Identified by match to protein family HMM PF02417; overlaps another CDS with the same product name. (185 aa)    
Predicted Functional Partners:
EGC81590.1
Chromate transport protein; Identified by match to protein family HMM PF02417; overlaps another CDS with the same product name.
 
   
0.903
tkt
Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; Belongs to the transketolase family.
       0.559
EGC81517.1
Chromate transport protein; Identified by match to protein family HMM PF02417; overlaps another CDS with the same product name.
 
   
0.536
EGC81592.1
Hypothetical protein.
       0.529
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.