STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC82903.1Conserved domain protein. (244 aa)    
Predicted Functional Partners:
EGC82876.1
Transcriptional regulator, GntR family.
  
  
 0.881
EGC82873.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
    0.803
EGC82888.1
Finger-like domain protein; Identified by match to protein family HMM TIGR02098.
       0.780
npdA
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
       0.778
EGC82883.1
Conserved domain protein.
       0.773
EGC82879.1
Ribonuclease; Identified by match to protein family HMM PF00545.
       0.773
EGC82084.1
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
  
  
 0.677
EGC82804.1
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
  
  
 0.664
EGC81434.1
Conserved domain protein.
  
  0.584
EGC81387.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
    
 0.523
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
Server load: low (30%) [HD]