Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC82887.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
EGC82845.1
Hemerythrin HHE cation binding domain protein; Identified by match to protein family HMM PF01814.
 
     0.663
EGC82884.1
Hypothetical protein.
 
     0.617
EGC82560.1
Identified by match to protein family HMM PF00881.
  
     0.554
EGC82898.1
Conserved domain protein.
 
     0.528
EGC82217.1
Conserved domain protein.
  
     0.503
hemZ
Coproporphyrinogen dehydrogenase HemZ; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR03994.
 
     0.480
EGC81968.1
Conserved domain protein.
  
     0.470
EGC82828.1
Hydrid cluster protein-associated redox disulfide domain protein; Identified by match to protein family HMM TIGR03980.
 
    0.463
EGC81957.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
     0.456
EGC81423.1
Conserved domain protein.
  
     0.455
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
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