STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGC82907.1Hypothetical protein; Identified by glimmer; putative. (334 aa)    
Predicted Functional Partners:
EGC82904.1
Putative PTS system glucose-specific EIICBA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830.
  
 
 0.926
crr
Glucose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830.
  
 
 0.926
EGC81625.1
Amino acid permease; Identified by match to protein family HMM PF00324.
   
 0.891
pulA
Pullulanase, type I; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.777
EGC81518.1
PTS system sucrose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR01996.
  
 
 0.762
nagE
PTS system, N-acetylglucosamine-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR01998.
  
 
 0.762
glvC
PTS system maltose-specific EIICB component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02005.
  
 
 0.762
treP
PTS system trehalose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01992.
  
 
 0.762
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.711
EGC82467.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.678
Your Current Organism:
Anaerococcus prevotii ACS065VCol13
NCBI taxonomy Id: 879305
Other names: A. prevotii ACS-065-V-Col13, Anaerococcus prevotii ACS-065-V-Col13
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