STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS29835.1Radical SAM domain protein. (462 aa)    
Predicted Functional Partners:
ribA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.833
EGS30793.1
Phospholipase, patatin family.
 
     0.816
EGS30285.1
Putative membrane protein.
 
     0.814
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.747
EGS31425.1
RelA/SpoT domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
    
  0.733
EGS30456.1
RelA/SpoT domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
    
  0.733
EGS29957.1
SNARE-like domain protein.
     
 0.664
EGS31221.1
HTH domain protein.
  
 
 0.582
EGS29827.1
Transcriptional regulator, TetR family.
 
     0.564
EGS31172.1
Putative nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.536
Your Current Organism:
Peptoniphilus sp. F0436
NCBI taxonomy Id: 879308
Other names: P. sp. oral taxon 375 str. F0436, Peptoniphilus sp. oral taxon 375 str. F0436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.