| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS30256.1 | EGS30647.1 | HMPREF9130_1146 | HMPREF9130_1675 | ATPase, AAA family. | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.452 |
| EGS30256.1 | EGS30852.1 | HMPREF9130_1146 | HMPREF9130_1657 | ATPase, AAA family. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.903 |
| EGS30256.1 | dnaA | HMPREF9130_1146 | HMPREF9130_0517 | ATPase, AAA family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.408 |
| EGS30256.1 | dnaE | HMPREF9130_1146 | HMPREF9130_0662 | ATPase, AAA family. | DNA polymerase III, alpha subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.978 |
| EGS30256.1 | dnaN | HMPREF9130_1146 | HMPREF9130_0518 | ATPase, AAA family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.981 |
| EGS30256.1 | dnaX | HMPREF9130_1146 | HMPREF9130_0652 | ATPase, AAA family. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.902 |
| EGS30256.1 | holA | HMPREF9130_1146 | HMPREF9130_1753 | ATPase, AAA family. | DNA polymerase III, delta subunit. | 0.983 |
| EGS30647.1 | EGS30256.1 | HMPREF9130_1675 | HMPREF9130_1146 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ATPase, AAA family. | 0.452 |
| EGS30647.1 | EGS30852.1 | HMPREF9130_1675 | HMPREF9130_1657 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.450 |
| EGS30647.1 | dinB | HMPREF9130_1675 | HMPREF9130_0192 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.637 |
| EGS30647.1 | dnaA | HMPREF9130_1675 | HMPREF9130_0517 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.469 |
| EGS30647.1 | dnaE | HMPREF9130_1675 | HMPREF9130_0662 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA polymerase III, alpha subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.619 |
| EGS30647.1 | dnaN | HMPREF9130_1675 | HMPREF9130_0518 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.990 |
| EGS30647.1 | dnaX | HMPREF9130_1675 | HMPREF9130_0652 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.537 |
| EGS30647.1 | holA | HMPREF9130_1675 | HMPREF9130_1753 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA polymerase III, delta subunit. | 0.573 |
| EGS30647.1 | polA | HMPREF9130_1675 | HMPREF9130_1676 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.998 |
| EGS30647.1 | xth | HMPREF9130_1675 | HMPREF9130_2149 | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Exodeoxyribonuclease III. | 0.846 |
| EGS30852.1 | EGS30256.1 | HMPREF9130_1657 | HMPREF9130_1146 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ATPase, AAA family. | 0.903 |
| EGS30852.1 | EGS30647.1 | HMPREF9130_1657 | HMPREF9130_1675 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 5'-3' exonuclease, N-terminal resolvase-like domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.450 |
| EGS30852.1 | dinB | HMPREF9130_1657 | HMPREF9130_0192 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.820 |
