Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS29954.1 | EGS30105.1 | HMPREF9130_2011 | HMPREF9130_2008 | Hypothetical protein. | Hypothetical protein. | 0.444 |
| EGS29954.1 | EGS30333.1 | HMPREF9130_2011 | HMPREF9130_2014 | Hypothetical protein. | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.746 |
| EGS29954.1 | EGS30387.1 | HMPREF9130_2011 | HMPREF9130_2010 | Hypothetical protein. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.568 |
| EGS29954.1 | EGS30707.1 | HMPREF9130_2011 | HMPREF9130_2013 | Hypothetical protein. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.746 |
| EGS29954.1 | EGS31200.1 | HMPREF9130_2011 | HMPREF9130_2009 | Hypothetical protein. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.568 |
| EGS29954.1 | EGS31246.1 | HMPREF9130_2011 | HMPREF9130_2015 | Hypothetical protein. | Type II/IV secretion system protein. | 0.427 |
| EGS29954.1 | EGS31340.1 | HMPREF9130_2011 | HMPREF9130_2012 | Hypothetical protein. | Hypothetical protein. | 0.746 |
| EGS30105.1 | EGS29954.1 | HMPREF9130_2008 | HMPREF9130_2011 | Hypothetical protein. | Hypothetical protein. | 0.444 |
| EGS30105.1 | EGS30333.1 | HMPREF9130_2008 | HMPREF9130_2014 | Hypothetical protein. | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.442 |
| EGS30105.1 | EGS30387.1 | HMPREF9130_2008 | HMPREF9130_2010 | Hypothetical protein. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.600 |
| EGS30105.1 | EGS30707.1 | HMPREF9130_2008 | HMPREF9130_2013 | Hypothetical protein. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.445 |
| EGS30105.1 | EGS31200.1 | HMPREF9130_2008 | HMPREF9130_2009 | Hypothetical protein. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.875 |
| EGS30105.1 | EGS31340.1 | HMPREF9130_2008 | HMPREF9130_2012 | Hypothetical protein. | Hypothetical protein. | 0.431 |
| EGS30333.1 | EGS29954.1 | HMPREF9130_2014 | HMPREF9130_2011 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.746 |
| EGS30333.1 | EGS30105.1 | HMPREF9130_2014 | HMPREF9130_2008 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.442 |
| EGS30333.1 | EGS30387.1 | HMPREF9130_2014 | HMPREF9130_2010 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.559 |
| EGS30333.1 | EGS30707.1 | HMPREF9130_2014 | HMPREF9130_2013 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.966 |
| EGS30333.1 | EGS31200.1 | HMPREF9130_2014 | HMPREF9130_2009 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conserved domain protein; Overlaps another CDS with the same product name. | 0.550 |
| EGS30333.1 | EGS31246.1 | HMPREF9130_2014 | HMPREF9130_2015 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Type II/IV secretion system protein. | 0.996 |
| EGS30333.1 | EGS31340.1 | HMPREF9130_2014 | HMPREF9130_2012 | Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.773 |
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