Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EGS30333.1Type II secretion system F domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. (325 aa)    
Predicted Functional Partners:
EGS31246.1
Type II/IV secretion system protein.
 
 
 0.998
EGS30707.1
Prepilin-type cleavage/methylation N-terminal domain protein.
 
  
 0.966
EGS31399.1
General secretion pathway protein K-like protein.
  
  
 0.839
EGS30820.1
Hypothetical protein.
  
  
 0.815
EGS31340.1
Hypothetical protein.
       0.773
EGS29954.1
Hypothetical protein.
       0.746
ssb
Single-stranded DNA-binding protein.
 
    0.722
EGS31041.1
Putative single-stranded DNA-binding protein.
 
    0.721
EGS29687.1
DNA internalization competence protein ComEC/Rec2-like protein.
  
  
 0.687
dprA
DNA protecting protein DprA.
 
  
 0.667
Your Current Organism:
Peptoniphilus sp. F0436
NCBI taxonomy Id: 879308
Other names: P. sp. oral taxon 375 str. F0436, Peptoniphilus sp. oral taxon 375 str. F0436
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