STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS30733.1Peptidase, M56 domain protein. (423 aa)    
Predicted Functional Partners:
EGS30638.1
Transcriptional regulator, BlaI/MecI/CopY family.
 
  
  0.972
EGS31318.1
Hypothetical protein.
 
     0.851
EGS29762.1
Hypothetical protein.
  
  
  0.758
EGS30724.1
Hypothetical protein.
  
     0.684
EGS30839.1
Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
  
  0.670
EGS29730.1
Hypothetical protein.
  
     0.645
EGS30198.1
Efflux ABC transporter, permease protein.
  
     0.640
EGS31160.1
CAAX amino terminal protease family protein.
  
     0.634
EGS30932.1
Conserved domain protein.
  
     0.633
EGS30627.1
Translation initiation factor IF-2, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
   
 0.625
Your Current Organism:
Peptoniphilus sp. F0436
NCBI taxonomy Id: 879308
Other names: P. sp. oral taxon 375 str. F0436, Peptoniphilus sp. oral taxon 375 str. F0436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.