STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XF48RRM domain-containing protein. (920 aa)    
Predicted Functional Partners:
A0A0J0XFD5
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
  0.894
A0A0J0XKF5
Uncharacterized protein.
    
   0.881
A0A0J1BDD2
RNA-binding domain-containing protein.
    
 0.739
A0A0J0XWS4
Uncharacterized protein.
    
 0.710
A0A0J1B1V2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.709
A0A0J1BBQ0
Nuclear cap-binding protein subunit 2.
    
 0.696
A0A0J1AV09
Small nuclear ribonucleoprotein Sm D3.
    
 0.688
A0A0J0XSS2
RNA-binding domain-containing protein.
    
 0.686
A0A0J1AVX6
RRM domain-containing protein.
    
 0.686
A0A0J0XKY9
Small nuclear ribonucleoprotein G.
    
 0.683
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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